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American Journal of Epidemiology Advance Access originally published online on November 30, 2005
American Journal of Epidemiology 2006 163(2):181-187; doi:10.1093/aje/kwj024
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American Journal of Epidemiology Copyright © 2005 by the Johns Hopkins Bloomberg School of Public Health All rights reserved; printed in U.S.A.

Practice of Epidemiology

Mortality due to Influenza in the United States—An Annualized Regression Approach Using Multiple-Cause Mortality Data

Jonathan Dushoff1,2, Joshua B. Plotkin3, Cecile Viboud2, David J. D. Earn4 and Lone Simonsen5

1 Department of Ecology and Evolutionary Biology, Princeton University, Princeton, NJ
2 Fogarty International Center, National Institutes of Health, Bethesda, MD
3 Harvard University, Cambridge, MA
4 Department of Mathematics and Statistics, McMaster University, Hamilton, Ontario, Canada
5 National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, MD

Correspondence to Dr. Jonathan Dushoff, Department of Ecology and Evolutionary Biology, Princeton University, Guyot Hall, Princeton, NJ 08544 (e-mail: dushoff{at}eno.princeton.edu).

Influenza is an important cause of mortality in temperate countries, but there is substantial controversy as to the total direct and indirect mortality burden imposed by influenza viruses. The authors have extracted multiple-cause death data from public-use data files for the United States from 1979 to 2001. The current research reevaluates attribution of deaths to influenza, by use of an annualized regression approach: comparing measures of excess deaths with measures of influenza virus prevalence by subtype over entire influenza seasons and attributing deaths to influenza by a regression model. This approach is more conservative in its assumptions than is earlier work, which used weekly regression models, or models based on fitting baselines, but it produces results consistent with these other methods, supporting the conclusion that influenza is an important cause of seasonal excess deaths. The regression model attributes an annual average of 41,400 (95% confidence interval: 27,100, 55,700) deaths to influenza over the period 1979–2001. The study also uses regional death data to investigate the effects of cold weather on annualized excess deaths.

cause of death; influenza; linear regression; mortality; seasons; temperature; time series; United States


Abbreviations: NAD, normalized annual death series; Tthresh, threshold temperature


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